STRINGSTRING
NGR_c08310 protein (Sinorhizobium fredii NGR234) - STRING interaction network
"NGR_c08310" - annotation not available in Sinorhizobium fredii NGR234
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NGR_c08310annotation not available (332 aa)    
Predicted Functional Partners:
glpD2
annotation not available (505 aa)
   
  0.934
NGR_c28720
annotation not available (327 aa)
   
 
  0.904
NGR_c26790
annotation not available (782 aa)
       
    0.902
NGR_a03890
Uncharacterized protein y4eD; y4eD; NGR234_83 (375 aa)
   
   
    0.857
NGR_c18110
annotation not available (264 aa)
   
   
    0.829
NGR_c08320
annotation not available (332 aa)
   
        0.593
cheA2
annotation not available (764 aa)
     
      0.589
NGR_c23820
annotation not available (139 aa)
   
          0.561
NGR_c28930
annotation not available (413 aa)
   
        0.519
repA
Putative replication protein A; y4cK; NGR234_46; Belongs to the ParA family (407 aa)
   
   
  0.516
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium fredii NGR234, Sinorhizobium sp. NGR234
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