STRINGSTRING
NGR_c08400 protein (Sinorhizobium fredii NGR234) - STRING interaction network
"NGR_c08400" - annotation not available in Sinorhizobium fredii NGR234
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NGR_c08400annotation not available (160 aa)    
Predicted Functional Partners:
NGR_c08390
annotation not available (110 aa)
 
     
  0.930
NGR_c08410
annotation not available (120 aa)
 
          0.898
NGR_c08380
UDP-glucuronate 5’-epimerase; UDP-glucuronic acidepimerase (341 aa)
              0.609
NGR_c36380
annotation not available (53 aa)
 
          0.538
NGR_c15930
annotation not available (420 aa)
   
          0.467
NGR_c29620
annotation not available (235 aa)
   
        0.452
NGR_c23820
annotation not available (139 aa)
   
          0.412
NGR_c17480
annotation not available (177 aa)
   
          0.412
cya3
annotation not available (500 aa)
   
          0.406
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium fredii NGR234, Sinorhizobium sp. NGR234
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