STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACP24633.1Hypothetical protein. (306 aa)    
Predicted Functional Partners:
recO
DNA repair protein RecO; Involved in DNA repair and RecF pathway recombination.
       0.572
ACP25902.1
Putative ErfK/YbiS/YhnG family protein.
  
     0.571
ACP24318.1
Invasion associated locus B.
  
     0.551
ACP25420.1
Hypothetical protein.
  
     0.528
ACP23827.1
Hypothetical protein.
  
     0.496
ACP24325.1
Lipoprotein, putative.
 
  
 0.464
ACP27105.1
Putative transmembrane protein.
  
     0.461
ACP26476.1
Putative periplasmic protein, putative exported protein.
 
  
 0.452
ACP25044.1
Hypothetical protein.
  
     0.443
ACP25419.1
Hypothetical protein.
  
     0.434
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium sp. NGR234
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.