Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACP24645.1Hypothetical protein. (179 aa)    
Predicted Functional Partners:
ACP24644.1
Hypothetical protein.
 
     0.864
ACP24646.1
Putative hydrolase protein.
 
     0.844
ACP24647.1
Putative aminomethyltransferase protein; Glycine cleavage; Belongs to the GcvT family.
       0.824
ACP24650.1
Hypothetical protein.
 
     0.741
ACP23978.1
Hypothetical protein, putative transmembrane protein.
  
     0.730
ACP24556.1
Hypothetical protein.
  
     0.690
ACP24512.1
Hypothetical protein.
  
     0.669
ACP24648.1
Hypothetical protein.
 
     0.650
ACP26462.1
Hypothetical protein.
  
     0.638
ACP26520.1
Hypothetical protein associated with outer membrane protein, beta-barrel.
  
     0.632
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium sp. NGR234
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