Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ACP24662.1Hypothetical ABC transporter ATP-binding protein. (630 aa)    
Predicted Functional Partners:
ACP25931.1
Putative ATP-binding component of ABC transporter; Belongs to the ABC transporter superfamily.
 
     
0.761
hemH
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family.
   
 
 0.714
ACP25914.1
Putative ATP-binding component of ABC transporter; Belongs to the ABC transporter superfamily.
 
     
0.648
psd
Phosphatidylserine decarboxylase; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer).
       0.630
pssA
CDP-diacylglycerol--serine O-phosphatidyltransferase; Phosphatidylserine synthase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
       0.625
ACP25439.1
Putative ATP-binding component of ABC transporter.
  
 
0.583
ACP26564.1
Putative ABC transporter, ATP-binding protein, ATPase.
  
 
0.577
ACP24661.1
LysM domain protein.
       0.573
ACP25440.1
Putative ATP-binding component of ABC transporter.
  
 
0.568
msbA
Lipid A export ATP-binding/permease protein MsbA.
  
 
0.563
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium sp. NGR234
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