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lptD protein (Sinorhizobium fredii NGR234) - STRING interaction network
"lptD" - LPS-assembly protein LptD in Sinorhizobium fredii NGR234
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Cooccurence
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Textmining
[Homology]
Score
lptDLPS-assembly protein LptD; Involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane; Belongs to the LptD family (782 aa)    
Predicted Functional Partners:
NGR_c09020
annotation not available (360 aa)
 
 
  0.972
NGR_c09030
annotation not available (390 aa)
 
 
 
  0.959
NGR_c09000
annotation not available (312 aa)
 
   
  0.922
NGR_c00190
annotation not available (187 aa)
 
 
  0.861
NGR_c00200
annotation not available (239 aa)
 
     
  0.793
NGR_c09680
annotation not available (168 aa)
   
     
  0.784
ppiD
annotation not available (630 aa)
 
   
  0.762
bamA
Outer membrane protein assembly factor BamA; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane (777 aa)
 
 
  0.719
NGR_c31470
Outer-membrane lipoprotein carrier protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane) (220 aa)
   
     
  0.714
NGR_c09220
annotation not available (212 aa)
   
   
  0.699
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium fredii NGR234, Sinorhizobium sp. NGR234
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