STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACP24705.1Hypothetical protein. (186 aa)    
Predicted Functional Partners:
ACP24704.1
Hypothetical protein.
       0.800
ACP24706.1
Hypothetical ABC-transporter permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
     0.616
ACP25901.1
Hypothetical protein.
  
     0.495
fliM
Flagellar motor switch protein FliM.
  
     0.477
motD
Chemotaxis protein motility protein D.
  
     0.452
ACP24061.1
Predicted LuxR family transcriptional regulator.
  
     0.451
ACP24086.1
Hypothetical protein.
  
     0.438
motC
Chemotaxis protein motility protein C.
  
     0.427
cpdA
Predicted metallophosphoesterase; Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes.
  
     0.423
ACP26637.1
Hypothetical protein.
  
     0.419
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium sp. NGR234
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