Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ACP24712.1Putative outer membrane protein. (212 aa)    
Predicted Functional Partners:
ACP24606.1
Putative outer membrane protein y4fJ precursor; Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane.
  
 
 0.774
ACP24608.1
Hypothetical protein; Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane.
  
 
 0.760
ACP25044.1
Hypothetical protein.
  
     0.743
ACP23854.1
Hypothetical protein.
  
     0.738
ACP25433.1
Kinesin-like protein.
 
     0.717
ACP25244.1
Putative invasion-associated protein.
  
     0.708
ACP25825.1
Hypothetical protein.
  
   
 0.708
ACP24690.1
Putative survival protein SurA, probable peptidyl-prolyl cis-trans isomerase protein.
  
 
 
 0.700
ACP25465.1
Hypothetical protein.
  
     0.690
ACP24318.1
Invasion associated locus B.
  
     0.687
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium sp. NGR234
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