STRINGSTRING
NGR_c09240 protein (Sinorhizobium fredii NGR234) - STRING interaction network
"NGR_c09240" - annotation not available in Sinorhizobium fredii NGR234
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NGR_c09240annotation not available (224 aa)    
Predicted Functional Partners:
NGR_c09250
annotation not available (147 aa)
 
          0.854
NGR_c09230
annotation not available (196 aa)
              0.826
rlmJ
Ribosomal RNA large subunit methyltransferase J; Specifically methylates the adenine in position 2030 of 23S rRNA (293 aa)
              0.608
NGR_c34830
annotation not available (355 aa)
   
          0.572
NGR_c13280
annotation not available (86 aa)
   
          0.473
NGR_c09280
annotation not available (198 aa)
              0.448
NGR_c09270
annotation not available (710 aa)
              0.413
NGR_c21240
annotation not available (339 aa)
   
          0.412
NGR_c13270
annotation not available (245 aa)
   
          0.411
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium fredii NGR234, Sinorhizobium sp. NGR234
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