Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACP24742.1Putative transmembrane protein. (154 aa)    
Predicted Functional Partners:
ACP27000.1
RNA-binding S4 domain protein.
  
    0.740
ACP24340.1
Hypothetical protein.
  
     0.719
ACP27105.1
Putative transmembrane protein.
 
    0.698
ACP24743.1
Delta-aminolevulinic acid dehydratase; Belongs to the ALAD family.
       0.665
ACP23827.1
Hypothetical protein.
  
     0.647
ACP24745.1
Putative MarR family transcriptional regulator.
 
    0.617
ACP24318.1
Invasion associated locus B.
  
     0.610
ACP27339.1
Putative transglutaminase family protein cysteine peptidase, BTLCP.
  
     0.590
ACP25030.1
Transglutaminase-like cysteine peptidase, BTLCP.
  
     0.572
ACP27262.1
Putative membrane protein.
  
     0.558
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium sp. NGR234
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