Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACP24759.1Ubiquinol-cytochrome C chaperone. (179 aa)    
Predicted Functional Partners:
ACP24760.1
Hypothetical protein.
 
     0.730
ACP27340.1
Conserved hypothetical protein contains alpha/beta hydrolase fold family.
  
     0.671
ACP24758.1
Putative outer membrane protein.
       0.640
ACP24326.1
Hypothetical protein.
  
     0.547
ACP23972.1
Putative transmembrane protein.
 
     0.521
ACP25134.1
Hypothetical protein.
  
     0.513
ACP25894.1
Transcriptional regulator, ArsR family.
  
     0.506
ACP27090.1
Putative transcriptional regulator, XRE family.
  
     0.503
ACP26927.1
Hypothetical protein with YbaK/prolyl-tRNA synthetase associated region.
  
     0.487
plsX
Fatty acid/phospholipid synthesis protein PlsX; Catalyzes the reversible formation of acyl-phosphate (acyl- PO(4)) from acyl-[acyl-carrier-protein] (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA.
       0.485
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium sp. NGR234
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