Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
ACP24770.1Putative lipid carrier protein-like protein. (168 aa)    
Predicted Functional Partners:
ACP24768.1
Putative protease.
 
 
 0.997
ACP24769.1
Protease YhbU precursor.
 
 
 0.997
ACP24771.1
3-octaprenyl-4-hydroxybenzoate carboxy-lyase; Polyprenylp-hydroxybenzoate decarboxylase; Belongs to the UbiD family.
 
  
 0.971
ubiG
3-demethylubiquinone-9 3-methyltransferase; O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway; Belongs to the methyltransferase superfamily. UbiG/COQ3 family.
     
 0.908
ubiE3
Ubiquinone/menaquinone biosynthesis methyltransferase UbiE; Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2-polyprenyl-3- methyl-6-methoxy-1,4-benzoquinol (DMQH2).
    
  0.901
ACP25220.1
2-octaprenyl-6-methoxyphenol hydroxylase.
     
 0.900
ACP26887.1
Putative 2-octaprenyl-6-methoxyphenyl hydroxylase.
     
 0.900
ACP24767.1
Hypothetical protein.
       0.824
ACP24766.1
Hypothetical protein.
       0.718
ACP24784.1
Putative membrane protein, NnrS-like protein.
 
    0.713
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium sp. NGR234
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