STRINGSTRING
nnrU protein (Sinorhizobium fredii NGR234) - STRING interaction network
"nnrU" - annotation not available in Sinorhizobium fredii NGR234
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nnrUannotation not available (228 aa)    
Predicted Functional Partners:
NGR_c09940
annotation not available (403 aa)
 
          0.711
NGR_c09830
annotation not available (51 aa)
 
          0.704
NGR_c09800
annotation not available (168 aa)
   
          0.625
norE
annotation not available (183 aa)
 
          0.594
norC
annotation not available (150 aa)
 
          0.564
norD
annotation not available (631 aa)
 
          0.518
nirV
annotation not available (304 aa)
   
          0.492
NGR_c09780
annotation not available (311 aa)
   
          0.486
norB
annotation not available (448 aa)
 
          0.475
NGR_c09920
annotation not available (171 aa)
   
          0.431
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium fredii NGR234, Sinorhizobium sp. NGR234
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