Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACP24803.1Hypothetical protein. (415 aa)    
Predicted Functional Partners:
ACP24802.1
Putative transmembrane succinoglycan biosynthesis transport protein.
 
   
 0.828
ACP24309.1
Putative polysaccharide deacetylase protein.
 
   
 0.822
ACP24798.1
Putative transmembrane protein.
 
   
 0.802
ACP26423.1
Putative polysaccharide export related protein.
 
  
 0.792
ACP24800.1
Glycosyl transferase.
 
   
 0.772
ACP26609.1
Hypothetical protein.
 
     0.767
ACP25432.1
Hypothetical protein.
  
     0.755
ACP25031.1
Hypothetical protein.
  
     0.736
ACP26208.1
Conserved hypothetical protein.
  
     0.723
ACP24561.1
Hypothetical protein.
  
     0.712
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium sp. NGR234
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