STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACP24813.1Putative thioesterase. (143 aa)    
Predicted Functional Partners:
ACP24814.1
enoyl-CoA hydratase.
 
 
 0.617
ACP26896.1
Conserved hypothetical protein.
  
     0.537
ACP24009.1
Beta-ketoacyl synthase.
  
 
 0.530
ACP24399.1
long-chain-fatty-acid--CoA ligase.
  
 
 0.516
rplM
50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.
  
    0.515
ACP23985.1
Predicted two-component sensor histidine kinase.
 
 
   0.509
rpsI
Ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.
       0.503
plsX
Fatty acid/phospholipid synthesis protein PlsX; Catalyzes the reversible formation of acyl-phosphate (acyl- PO(4)) from acyl-[acyl-carrier-protein] (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA.
  
  
 0.438
ACP23969.1
acyl-CoA dehydrogenase protein.
 
  
 0.414
ACP24286.1
acyl-CoA dehydrogenase domain protein.
 
  
 0.400
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium sp. NGR234
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