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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Knowledge-based Evidence
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experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ACP24822.1Phospholipase D/transphosphatidylase. (519 aa)    
Predicted Functional Partners:
ACP25142.1
Cardiolipin synthase.
  
  
 
0.927
ACP24821.1
Putative endonuclease/exonuclease/phosphatase family protein.
 
    0.769
ACP25235.1
Na+/Pi-cotransporter.
 
     0.537
ACP24719.1
lysyl-tRNA synthetase 2; lysine--tRNA ligase 2; LysRS 2.
 
  
 0.533
ispDF
IspD/IspF bifunctional enzyme; Bifunctional enzyme that catalyzes the formation of 4- diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl-D- erythritol 4-phosphate (MEP) (IspD), and catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C- methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP) (IspF).
     
 0.446
clpP
ATP-dependent Clp protease proteolytic subunit; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family.
     
 0.439
gmk
Guanylate kinase; Essential for recycling GMP and indirectly, cGMP.
   
 0.420
ACP24820.1
Cytochrome P450 hydroxylase.
   
 
 0.405
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium sp. NGR234
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