STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACP24877.1acyl-CoA dehydrogenase. (550 aa)    
Predicted Functional Partners:
fadB
3-hydroxyacyl-CoA dehydrogenase.
 
 0.959
ACP26365.1
enoyl-CoA hydratase/isomerase/3-hydroxyacyl-CoA dehydrogenase.
 
 0.914
ACP24399.1
long-chain-fatty-acid--CoA ligase.
  
 0.825
fadA
acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
 
 0.795
ACP26440.1
Electron transfer flavoprotein, alpha subunit.
 
 0.770
ACP25807.1
Electron transfer flavoprotein, alpha subunit.
 
 
 0.769
ACP26377.1
Putative beta-ketoadipyl CoA thiolase.
  
 0.749
ACP25806.1
Electron transfer flavoprotein, beta subunit.
  
 
 0.702
ACP26439.1
beta-ETF; electrontransfer flavoprotein small subunit; ETFSS.
  
 
 0.702
ACP24009.1
Beta-ketoacyl synthase.
  
 0.693
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium sp. NGR234
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