STRINGSTRING
NGR_c12980 protein (Sinorhizobium fredii NGR234) - STRING interaction network
"NGR_c12980" - annotation not available in Sinorhizobium fredii NGR234
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NGR_c12980annotation not available (757 aa)    
Predicted Functional Partners:
ntrX
annotation not available (454 aa)
 
   
  0.994
NGR_c13000
annotation not available (287 aa)
         
  0.885
hfq
RNA-binding protein Hfq; RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs (80 aa)
         
  0.706
ntrB
annotation not available (384 aa)
 
   
0.703
NGR_c01850
annotation not available (1168 aa)
     
 
  0.696
NGR_c34460
annotation not available (917 aa)
     
 
0.692
NGR_c22860
annotation not available (233 aa)
 
 
 
  0.691
ntrC
Sensor glnL; nitrogen regulator I, NRI (484 aa)
     
  0.664
NGR_c10800
annotation not available (455 aa)
     
 
  0.652
cheA2
annotation not available (764 aa)
         
  0.640
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium fredii NGR234, Sinorhizobium sp. NGR234
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