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NGR_c13000 protein (Sinorhizobium fredii NGR234) - STRING interaction network
"NGR_c13000" - annotation not available in Sinorhizobium fredii NGR234
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NGR_c13000annotation not available (287 aa)    
Predicted Functional Partners:
NGR_c08780
Alanine racemase; Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids; Belongs to the alanine racemase family (409 aa)
       
  0.928
hisC1
annotation not available (368 aa)
 
 
  0.919
attA1
annotation not available (410 aa)
 
 
  0.917
aatA3
annotation not available (400 aa)
 
  0.917
putA2
Bifunctional protein PutA; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family (1230 aa)
   
  0.916
putA1
Bifunctional protein PutA; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family (1235 aa)
   
  0.916
NGR_c36470
annotation not available (389 aa)
     
 
  0.914
ddlB
D-alanine--D-alanine ligase; Cell wall formation (306 aa)
       
  0.907
NGR_a01660
Uncharacterized protein y4sG; Could be involved in the biosynthesis of a cell wall component (336 aa)
       
  0.907
aatA2
annotation not available (429 aa)
   
 
  0.906
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium fredii NGR234, Sinorhizobium sp. NGR234
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