STRINGSTRING
aapM protein (Sinorhizobium fredii NGR234) - STRING interaction network
"aapM" - annotation not available in Sinorhizobium fredii NGR234
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
aapMannotation not available (384 aa)    
Predicted Functional Partners:
aapP
annotation not available (258 aa)
  0.999
aapQ
annotation not available (397 aa)
   
0.993
NGR_c13170
annotation not available (341 aa)
 
 
  0.993
NGR_a01510
Probable amino-acid ABC transporter ATP-binding protein y4tH; Probably part of a binding-protein-dependent transport system y4tEFGH for an amino acid. Probably responsible for energy coupling to the transport system (257 aa)
 
  0.818
NGR_c32850
annotation not available (253 aa)
 
  0.774
NGR_c30220
annotation not available (259 aa)
 
  0.744
NGR_c01960
annotation not available (257 aa)
 
          0.695
NGR_c08100
annotation not available (373 aa)
           
  0.660
NGR_c17180
annotation not available (260 aa)
   
  0.625
NGR_c01950
annotation not available (259 aa)
   
  0.560
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium fredii NGR234, Sinorhizobium sp. NGR234
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