STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
aapMPutative amino acid ABC transporter, permease protein. (384 aa)    
Predicted Functional Partners:
aapQ
Putative amino-acid ABC transporter membrane protein.
 
0.998
aapP
Putative ATP-binding component of a transport system.
 
 0.997
ACP25097.1
Hypothetical protein.
 
 0.984
ACP26765.1
ABC transport system, ATP-binding protein.
 
 
 0.914
ACP27015.1
Amino acid ABC transporter, ATP-binding protein.
 
 
 0.880
ACP25482.1
Putative solute-binding component of ABC transporter; Belongs to the bacterial solute-binding protein 3 family.
 
 0.750
ACP23996.1
Amino acid ABC transporter, ATP-binding protein.
  
   
 0.715
ACP23960.1
Predicted extracellular amino acid solute-binding protein.
 
 
 0.692
ACP23995.1
Putative ABC transporter, periplasmic amino acid-binding protein.
 
 0.662
ACP27013.1
Putative extracellular solute-binding protein, family 3; Belongs to the bacterial solute-binding protein 3 family.
 
 0.648
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium sp. NGR234
Server load: low (28%) [HD]