Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ACP24375.1 | ACP25109.1 | NGR_c05820 | NGR_c13290 | Superfamily II DNA/RNA helicase and SNF2 family-related protein. | HIT family protein. | 0.491 |
ACP24375.1 | rpoA | NGR_c05820 | NGR_c12140 | Superfamily II DNA/RNA helicase and SNF2 family-related protein. | DNA-directed RNA polymerase alpha chain; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.966 |
ACP24375.1 | rpoB | NGR_c05820 | NGR_c11830 | Superfamily II DNA/RNA helicase and SNF2 family-related protein. | DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.966 |
ACP24375.1 | rpoC | NGR_c05820 | NGR_c11840 | Superfamily II DNA/RNA helicase and SNF2 family-related protein. | DNA-directed RNA polymerase beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.914 |
ACP25109.1 | ACP24375.1 | NGR_c13290 | NGR_c05820 | HIT family protein. | Superfamily II DNA/RNA helicase and SNF2 family-related protein. | 0.491 |
ACP25109.1 | ACP25110.1 | NGR_c13290 | NGR_c13300 | HIT family protein. | Conserved hypothetical protein. | 0.683 |
ACP25109.1 | ACP25111.1 | NGR_c13290 | NGR_c13310 | HIT family protein. | Glycerophosphoryl diester phosphodiesterase. | 0.510 |
ACP25109.1 | ACP25112.1 | NGR_c13290 | NGR_c13320 | HIT family protein. | Conserved hypothetical protein. | 0.549 |
ACP25109.1 | ACP26582.1 | NGR_c13290 | NGR_c28360 | HIT family protein. | Hypothetical protein. | 0.508 |
ACP25109.1 | fliG | NGR_c13290 | NGR_c02660 | HIT family protein. | Flagellar motor switch protein FliG. | 0.461 |
ACP25109.1 | hisS | NGR_c13290 | NGR_c04010 | HIT family protein. | histidyl-tRNA synthetase. | 0.546 |
ACP25109.1 | rpoA | NGR_c13290 | NGR_c12140 | HIT family protein. | DNA-directed RNA polymerase alpha chain; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.578 |
ACP25109.1 | rpoB | NGR_c13290 | NGR_c11830 | HIT family protein. | DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.533 |
ACP25109.1 | rpoC | NGR_c13290 | NGR_c11840 | HIT family protein. | DNA-directed RNA polymerase beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.590 |
ACP25110.1 | ACP25109.1 | NGR_c13300 | NGR_c13290 | Conserved hypothetical protein. | HIT family protein. | 0.683 |
ACP25110.1 | ACP25111.1 | NGR_c13300 | NGR_c13310 | Conserved hypothetical protein. | Glycerophosphoryl diester phosphodiesterase. | 0.581 |
ACP25110.1 | ACP25112.1 | NGR_c13300 | NGR_c13320 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.569 |
ACP25111.1 | ACP25109.1 | NGR_c13310 | NGR_c13290 | Glycerophosphoryl diester phosphodiesterase. | HIT family protein. | 0.510 |
ACP25111.1 | ACP25110.1 | NGR_c13310 | NGR_c13300 | Glycerophosphoryl diester phosphodiesterase. | Conserved hypothetical protein. | 0.581 |
ACP25111.1 | ACP25112.1 | NGR_c13310 | NGR_c13320 | Glycerophosphoryl diester phosphodiesterase. | Conserved hypothetical protein. | 0.781 |
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