STRINGSTRING
phbC2 protein (Sinorhizobium fredii NGR234) - STRING interaction network
"phbC2" - Poly(3-hydroxybutyrate) polymerase in Sinorhizobium fredii NGR234
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
phbC2Poly(3-hydroxybutyrate) polymerase; PHB polymerase; PHB synthase; poly(3-hydroxyalkanoate) polymerase; PHA polymerase; PHA synthase; polyhydroxyalkanoic acid synthase (614 aa)    
Predicted Functional Partners:
NGR_c33730
annotation not available (424 aa)
 
   
  0.974
NGR_c32710
annotation not available (241 aa)
 
   
  0.966
fadB
annotation not available (737 aa)
         
  0.915
phbC1
annotation not available (610 aa)
   
   
 
0.830
NGR_c32730
annotation not available (192 aa)
 
     
  0.787
NGR_c13990
annotation not available (186 aa)
              0.581
NGR_c32720
annotation not available (393 aa)
         
  0.524
map1
annotation not available (279 aa)
              0.505
radC
annotation not available (263 aa)
              0.504
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium fredii NGR234, Sinorhizobium sp. NGR234
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