Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| gcvH | gcvP | NGR_c15480 | NGR_c15470 | Glycine cleavage system H protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein. | Decarboxylating glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | 0.999 |
| gcvH | soxA2 | NGR_c15480 | NGR_c14340 | Glycine cleavage system H protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein. | Sarcosine oxidase, alpha subunit. | 0.957 |
| gcvP | gcvH | NGR_c15470 | NGR_c15480 | Decarboxylating glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | Glycine cleavage system H protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein. | 0.999 |
| gcvP | glxD | NGR_c15470 | NGR_c14400 | Decarboxylating glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | Glutamate synthase large subunit-like protein; Belongs to the glutamate synthase family. | 0.461 |
| gcvP | soxA2 | NGR_c15470 | NGR_c14340 | Decarboxylating glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | Sarcosine oxidase, alpha subunit. | 0.982 |
| gcvP | soxB1 | NGR_c15470 | NGR_c29040 | Decarboxylating glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | Sarcosine oxidase, beta subunit. | 0.915 |
| gcvP | soxD1 | NGR_c15470 | NGR_c29030 | Decarboxylating glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | Sarcosine oxidase, delta subunit. | 0.903 |
| gcvP | soxG1 | NGR_c15470 | NGR_c29010 | Decarboxylating glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | Sarcosine oxidase, gamma subunit. | 0.910 |
| gcvP | soxG2 | NGR_c15470 | NGR_c14330 | Decarboxylating glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | Sarcosine oxidase, gamma subunit. | 0.910 |
| glxB | glxD | NGR_c14380 | NGR_c14400 | Glutamine amidotransferase-like protein GlxB. | Glutamate synthase large subunit-like protein; Belongs to the glutamate synthase family. | 0.997 |
| glxB | soxA2 | NGR_c14380 | NGR_c14340 | Glutamine amidotransferase-like protein GlxB. | Sarcosine oxidase, alpha subunit. | 0.948 |
| glxB | soxB2 | NGR_c14380 | NGR_c14360 | Glutamine amidotransferase-like protein GlxB. | Sarcosine oxidase, beta subunit. | 0.948 |
| glxB | soxD2 | NGR_c14380 | NGR_c14350 | Glutamine amidotransferase-like protein GlxB. | Sarcosine oxidase, delta subunit. | 0.942 |
| glxB | soxG2 | NGR_c14380 | NGR_c14330 | Glutamine amidotransferase-like protein GlxB. | Sarcosine oxidase, gamma subunit. | 0.428 |
| glxD | gcvP | NGR_c14400 | NGR_c15470 | Glutamate synthase large subunit-like protein; Belongs to the glutamate synthase family. | Decarboxylating glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | 0.461 |
| glxD | glxB | NGR_c14400 | NGR_c14380 | Glutamate synthase large subunit-like protein; Belongs to the glutamate synthase family. | Glutamine amidotransferase-like protein GlxB. | 0.997 |
| glxD | soxA2 | NGR_c14400 | NGR_c14340 | Glutamate synthase large subunit-like protein; Belongs to the glutamate synthase family. | Sarcosine oxidase, alpha subunit. | 0.953 |
| glxD | soxB2 | NGR_c14400 | NGR_c14360 | Glutamate synthase large subunit-like protein; Belongs to the glutamate synthase family. | Sarcosine oxidase, beta subunit. | 0.947 |
| glxD | soxD2 | NGR_c14400 | NGR_c14350 | Glutamate synthase large subunit-like protein; Belongs to the glutamate synthase family. | Sarcosine oxidase, delta subunit. | 0.940 |
| soxA2 | gcvH | NGR_c14340 | NGR_c15480 | Sarcosine oxidase, alpha subunit. | Glycine cleavage system H protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein. | 0.957 |
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