STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACP25225.1Putative ABC transporter; Permease protein; Belongs to the binding-protein-dependent transport system permease family. (306 aa)    
Predicted Functional Partners:
ACP25224.1
Putative transmembrane component of ABC transporter; Belongs to the binding-protein-dependent transport system permease family.
 
 0.997
ACP25223.1
Probable sugar ABC transporter, ATP-binding protein.
 
 0.996
ACP25226.1
Putative ABC transporter; Substrate-binding protein.
 
 
 0.989
ACP27175.1
Inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
 0.989
ACP27174.1
Putative sugar ABC transporter, ATP-binding protein.
 
 0.984
ACP27264.1
Basic membrane lipoprotein.
 
 
 0.968
ACP27176.1
Inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
  
  
 
0.917
qor
Qor; quinone oxidoreductase.
       0.618
pcs
Putative phosphatidylcholine synthase; Condenses choline with CDP-diglyceride to produce phosphatidylcholine and CMP; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
       0.612
ACP24447.1
Hypothetical ABC transporter ATP-binding protein.
     0.461
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium sp. NGR234
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