Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ACP25226.1Putative ABC transporter; Substrate-binding protein. (356 aa)    
Predicted Functional Partners:
ACP25223.1
Probable sugar ABC transporter, ATP-binding protein.
 
 
 0.995
ACP25225.1
Putative ABC transporter; Permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.991
ACP25224.1
Putative transmembrane component of ABC transporter; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.989
ACP27174.1
Putative sugar ABC transporter, ATP-binding protein.
 
 
 0.970
ACP27176.1
Inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.963
ACP27175.1
Inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.952
ACP27264.1
Basic membrane lipoprotein.
  
 
 
0.921
qor
Qor; quinone oxidoreductase.
  
    0.532
pcs
Putative phosphatidylcholine synthase; Condenses choline with CDP-diglyceride to produce phosphatidylcholine and CMP; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
       0.530
gpt
Xanthine phosphoribosyltransferase; Acts on guanine, xanthine and to a lesser extent hypoxanthine; Belongs to the purine/pyrimidine phosphoribosyltransferase family. XGPT subfamily.
 
   
 0.471
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium sp. NGR234
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