STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACP25227.1Putative transcriptional regulator, GntR family. (251 aa)    
Predicted Functional Partners:
ACP25835.1
Putative transcriptional regulator, GntR family.
  
  
 0.686
ACP25091.1
Putative transcriptional regulator, GntR family.
  
  
 0.651
ACP24410.1
Putative HTH-type transcriptional regulator in the TAR-I ttuE-ttuC'intergenic region; ORFX.
  
  
 0.623
ACP24343.1
Putative transcriptional regulator, GntR family.
  
  
 0.516
ACP27095.1
Putative transcriptional regulator, GntR family.
  
  
 0.492
ACP24234.1
Putative IclR family transcriptional regulator.
 
  
 0.489
ACP25228.1
Hypothetical protein.
       0.478
ACP26767.1
Putative transcriptional regulator, GntR family.
  
  
 0.428
ACP25226.1
Putative ABC transporter; Substrate-binding protein.
       0.424
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium sp. NGR234
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