Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
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[Homology]
Score
ACP25262.1Putative transmembrane GGDEF sensory box protein. (409 aa)    
Predicted Functional Partners:
ACP24497.1
Putative GGDEF/EAL sensory box protein.
 
  
 0.786
ACP26591.1
Putative GGDEF family regulator.
 
   
 0.779
ACP26710.1
Sensory box/GGDEF family protein.
 
 
0.623
ACP24336.1
Putative diguanylate cyclase (GGDEF)/phosphodiesterase (EAL) with PAS domain.
 
 
0.596
ACP24202.1
Putative diguanylate cyclase (GGDEF)/phosphodiesterase (EAL) with PAS domain precursor.
 
 
0.553
flgF
Flagellar basal-body rod protein FlgF; Belongs to the flagella basal body rod proteins family.
   
   0.539
ACP26753.1
Putative transmembrane GGDEF/EAL domain protein.
 
  
0.518
ACP26659.1
Putative transmembrane sensory box GGDEF/EAL protein.
 
 
0.498
ACP26079.1
GGDEF family protein.
 
 
0.493
CpdB
2`,3`-cyclic-nucleotide 2`-phosphodiesterase; Belongs to the 5'-nucleotidase family.
  
    0.479
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium sp. NGR234
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