STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACP25277.1Hypothetical protein. (256 aa)    
Predicted Functional Partners:
ACP25278.1
Putative glycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
 
     0.917
ACP25279.1
Hypothetical protein.
 
     0.869
ACP25280.1
Predicted transcriptional regulator protein, LacI family.
 
    0.817
ACP25281.1
Predicted sugar ABC transporter, substrate-binding protein.
 
    0.733
iolB
Myo-inositol catabolism IolB domain protein.
  
  
 0.611
ACP25981.1
Putative oxidoreductase.
 
  
 0.587
iolD
Myo-inositol catabolism, acetolactate synthase protein IolD; Belongs to the TPP enzyme family.
  
  
 0.574
ACP27423.1
Thiamine pyrophosphate domain protein, TPP binding region; Belongs to the TPP enzyme family.
  
  
 0.574
ACP25541.1
Probable oxidoreductase protein.
 
  
 0.569
iolC
Myo-inositol catabolism IolC.
  
  
 0.540
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium sp. NGR234
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