STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACP25281.1Predicted sugar ABC transporter, substrate-binding protein. (454 aa)    
Predicted Functional Partners:
ACP25279.1
Hypothetical protein.
 
     0.807
ACP25278.1
Putative glycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
 
     0.735
ACP25277.1
Hypothetical protein.
 
    0.733
ACP26305.1
Putative permease component of ABC transporter.
 
 
 0.623
ACP26306.1
Putative sugar ABC transporter, permease protein.
 
 
 0.614
ACP25280.1
Predicted transcriptional regulator protein, LacI family.
     
 0.560
ACP27029.1
Conserved hypothetical protein.
 
     0.545
ACP24462.1
Hypothetical ABC transporter permease protein.
 
 
 0.541
ACP24110.1
Predicted alpha-glucoside ABC transport system permease protein.
 
 
 0.537
ACP24109.1
Predicted alpha-glucoside transport system permease protein.
 
 
 0.536
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium sp. NGR234
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.