STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACP25300.1Membrane protein associated metalloendopeptidase. (445 aa)    
Predicted Functional Partners:
ACP27232.1
Penicillin-binding protein, 1A family.
  
     0.684
ACP24563.1
Penicillin-binding protein 1A.
  
     0.656
ACP24901.1
Penicillin binding peptidoglycan synthetase protein.
 
   
 0.639
ACP24015.1
Penicillin-binding protein 1A.
  
     0.637
ACP25302.1
Bacterioferritin comigratory protein.
  
  
 0.596
ACP25301.1
Rhamnosyltransferase family protein.
       0.572
ACP24619.1
Signal peptidase I; Belongs to the peptidase S26 family.
 
  
 0.489
mtgA
Monofunctional biosynthetic peptidoglycan transglycosylase; Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors; Belongs to the glycosyltransferase 51 family.
  
     0.479
ACP25299.1
ATP-dependent RNA helicase; Belongs to the DEAD box helicase family.
     
 0.473
mltG
Aminodeoxychorismate lyase; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation. Belongs to the transglycosylase MltG family.
  
  
 0.471
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium sp. NGR234
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