STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sufBTransport protein associated with Fe-S cluster assembly SufB. (489 aa)    
Predicted Functional Partners:
ACP25310.1
ABC transporter involved in Fe-S cluster assembly, ATP-binding protein.
 
 0.999
ACP25311.1
ABC transporter involved in Fe-S cluster assembly, permease protein.
 
 
0.994
sufS
Cysteine desulfurase SufS; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family.
 
 
 0.983
ACP25314.1
Putative HesB nitrogen fixation family protein; Belongs to the HesB/IscA family.
  
 
 0.922
ACP25039.1
Possible nitrogen-fixing NifU-like protein.
 
  
 0.872
ACP25313.1
Putative FeS assembly protein.
 
   
 0.867
sufE
Putative cysteine desulfuration protein SufE.
 
 
 0.848
ACP24783.1
Putative aromatic ring hydroxylating enzyme.
 
   
 0.690
ACP25308.1
Cysteine desulfurase.
  
  
 0.621
hesB
Protein HesB, vegetative; Belongs to the HesB/IscA family.
  
 
 0.541
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium sp. NGR234
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.