Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
sufSCysteine desulfurase SufS; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. (417 aa)    
Predicted Functional Partners:
ACP25310.1
ABC transporter involved in Fe-S cluster assembly, ATP-binding protein.
 
  
 0.995
sufE
Putative cysteine desulfuration protein SufE.
 
 0.994
ACP25311.1
ABC transporter involved in Fe-S cluster assembly, permease protein.
 
 
 0.992
ACP25039.1
Possible nitrogen-fixing NifU-like protein.
 
 
 0.991
sufB
Transport protein associated with Fe-S cluster assembly SufB.
 
 
 0.986
ACP25313.1
Putative FeS assembly protein.
 
  
 0.927
trxB3
Thioredoxin reductase.
 
 
  0.920
ACP25308.1
Cysteine desulfurase.
  
 
0.779
ACP25314.1
Putative HesB nitrogen fixation family protein; Belongs to the HesB/IscA family.
  
 
 0.739
ACP24821.1
Putative endonuclease/exonuclease/phosphatase family protein.
   
   0.718
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium sp. NGR234
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