STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACP25390.1Hypothetical protein. (195 aa)    
Predicted Functional Partners:
ACP24516.1
Hypothetical protein.
  
     0.672
motD
Chemotaxis protein motility protein D.
  
     0.652
ACP25068.1
Putative acetyltransferase protein.
  
     0.647
ACP24541.1
Hypothetical protein.
  
     0.631
ACP26751.1
TPR repeat-containing protein; Similar to cellulose biosynthesis protein.
  
     0.615
ACP24593.1
Hypothetical membrane spanning protein.
  
     0.544
ACP25783.1
Hypothetical protein.
  
     0.540
ACP25389.1
Putative transcriptional regulator, GntR family.
       0.536
ACP25146.1
Hypothetical protein.
  
     0.531
ACP25688.1
Conserved hypothetical protein.
  
     0.529
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium sp. NGR234
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.