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trmJ protein (Sinorhizobium fredii NGR234) - STRING interaction network
"trmJ" - tRNA in Sinorhizobium fredii NGR234
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second shell of interactors
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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trmJtRNA (cytidine/uridine-2’-O-)-methyltransferase TrmJ; Catalyzes the formation of 2’O-methylated cytidine (Cm32) or 2’O-methylated uridine (Um32) at position 32 in tRNA (275 aa)    
Predicted Functional Partners:
murI
Glutamate racemase; Provides the (R)-glutamate required for cell wall biosynthesis (267 aa)
         
  0.893
cysS
Cysteine--tRNA ligase; CysRS; Belongs to the class-I aminoacyl-tRNA synthetase family (463 aa)
 
   
  0.812
NGR_c02110
annotation not available (199 aa)
 
            0.747
ftsJ
Ribosomal RNA large subunit methyltransferase E; Specifically methylates the uridine in position 2552 of 23S rRNA at the 2’-O position of the ribose in the fully assembled 50S ribosomal subunit (245 aa)
   
 
  0.670
icd
Isocitrate dehydrogenase [NADP]; Oxalosuccinatedecarboxylase; IDH; NADP+-specific ICDH; IDP; Belongs to the isocitrate and isopropylmalate dehydrogenases family (404 aa)
   
        0.647
trmD
tRNA (guanine-N(1)-)-methyltransferase; Specifically methylates guanosine-37 in various tRNAs; Belongs to the RNA methyltransferase TrmD family (240 aa)
           
  0.493
dusA
tRNA-dihydrouridine(20/20a) synthase; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines. Specifically modifies U20 and U20a in tRNAs; Belongs to the Dus family. DusA subfamily (385 aa)
   
   
  0.487
tolQ
annotation not available (239 aa)
   
          0.482
NGR_c34960
annotation not available (215 aa)
   
          0.458
comL
Outer membrane protein assembly factor BamD; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane (288 aa)
   
          0.458
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium fredii NGR234, Sinorhizobium sp. NGR234
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