STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACP25420.1Hypothetical protein. (308 aa)    
Predicted Functional Partners:
ACP25419.1
Hypothetical protein.
 
  
 0.980
MepA
Penicillin-insensitive murein endopeptidase.
  
     0.654
ACP24318.1
Invasion associated locus B.
  
     0.627
ACP27142.1
Conserved hypothetical protein contains ErfK/YbiS/YcfS/YnhG domain protein.
  
     0.624
ACP25044.1
Hypothetical protein.
  
     0.594
ACP24507.1
Hypothetical protein.
  
     0.589
ACP25421.1
Conserved hypothetical protein.
       0.589
ACP24340.1
Hypothetical protein.
  
     0.575
ACP26586.1
Conserved hypothetical protein.
  
     0.571
ACP27105.1
Putative transmembrane protein.
  
     0.559
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium sp. NGR234
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.