STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACP25428.1Putative transposase number 2 for insertion sequence NGRIS-16h. (386 aa)    
Predicted Functional Partners:
ACP25427.1
Putative transposase number 1 for insertion sequence NGRIS-16h; Belongs to the 'phage' integrase family.
 
     0.923
ACP26914.1
Putative transposase number 1 for insertion sequence NGRIS-16.
 
     0.775
ACP25536.1
Putative transposase number 3 for insertion sequence NGRIS-16a; Identical to y4hP of pNGR234a; Belongs to the transposase 25 family.
  
     0.491
ACP25537.1
Putative transposase number 2 for insertion sequence NGRIS-16a; Identical to y4hO of pNGR234a; Belongs to the transposase 34 family.
  
     0.447
ACP24381.1
Putative transposase number 3 for insertion sequence NGRIS-11a; Belongs to the transposase 25 family.
  
     0.429
ACP24380.1
Putative transposase number 2 for insertion sequence NGRIS-11a.
  
     0.413
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium sp. NGR234
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.