Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ACP25431.1Putative ferredoxin, 2Fe-2S. (106 aa)    
Predicted Functional Partners:
ACP25039.1
Possible nitrogen-fixing NifU-like protein.
  
 0.968
ACP24201.1
Putative ferredoxin reductase protein.
 
 
 0.956
ACP25314.1
Putative HesB nitrogen fixation family protein; Belongs to the HesB/IscA family.
 
 0.920
ACP25308.1
Cysteine desulfurase.
 
 0.917
ACP24009.1
Beta-ketoacyl synthase.
   
 0.891
dnaK2
Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
  
 
 0.802
fbcF3
Ubiquinol-cytochrome C reductase iron-sulfur subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
  
 
 0.712
fbcC
Cytochrome c1.
  
 
 0.673
gltB2
Glutamate synthase [NADPH] large chain.
    
 0.599
gltD
Glutamate synthase [NADPH] small chain.
    
 0.599
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium sp. NGR234
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