STRINGSTRING
NGR_c16670 protein (Sinorhizobium fredii NGR234) - STRING interaction network
"NGR_c16670" - annotation not available in Sinorhizobium fredii NGR234
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NGR_c16670annotation not available (122 aa)    
Predicted Functional Partners:
NGR_c35170
annotation not available (349 aa)
   
 
  0.880
NGR_c00280
annotation not available (755 aa)
 
 
  0.854
NGR_c34460
annotation not available (917 aa)
   
 
  0.837
NGR_c10140
annotation not available (415 aa)
   
        0.748
NGR_c03230
Predicted chemoreceptor y4fA; Methyl-accepting chemotaxis protein (841 aa)
   
 
  0.738
NGR_a03800
Probable chemoreceptor y4fA; Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of methylation. Attractants increase the level of methylation while repellents decrease the level of methylation (By similarity) (845 aa)
   
 
  0.738
cheW2
annotation not available (159 aa)
   
 
  0.737
NGR_c20840
annotation not available (154 aa)
   
 
  0.737
cheW1
annotation not available (155 aa)
   
 
  0.737
NGR_c07040
annotation not available (598 aa)
   
 
  0.725
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium fredii NGR234, Sinorhizobium sp. NGR234
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