STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACP25449.1Toulene ABC transporter, permease protein, putative. (321 aa)    
Predicted Functional Partners:
ACP25448.1
Putative ATP-binding component of ABC transporter.
 
 0.999
ACP25447.1
Putative solute-binding component of ABC transporter.
 
 0.997
ACP24372.1
Hypothetical protein.
  
 
 0.894
ACP24050.1
Hypothetical protein.
   
   0.863
ACP25446.1
Putative ABC transporter protein.
 
  
 0.760
bamA
Group 1 outer membrane protein precursor; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.
 
   
 0.652
ACP23822.1
Predicted ABC transporter, ATP-binding protein.
 
  
  0.640
ACP26123.1
Proline/glycine betaine ABC transporter, substrate-binding protein.
  
  
 0.574
ACP26564.1
Putative ABC transporter, ATP-binding protein, ATPase.
 
 
 0.565
msbA
Lipid A export ATP-binding/permease protein MsbA.
  
 
 0.500
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium sp. NGR234
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