STRINGSTRING
gph protein (Sinorhizobium fredii NGR234) - STRING interaction network
"gph" - annotation not available in Sinorhizobium fredii NGR234
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gphannotation not available (227 aa)    
Predicted Functional Partners:
rbcL2
annotation not available (420 aa)
       
  0.924
NGR_c12220
annotation not available (221 aa)
   
   
  0.907
NGR_c34780
annotation not available (319 aa)
   
 
    0.903
gyaR
annotation not available (334 aa)
   
 
    0.903
NGR_c03950
annotation not available (431 aa)
       
    0.902
glcE2
annotation not available (403 aa)
       
    0.900
glcD2
annotation not available (479 aa)
       
    0.900
rpe
annotation not available (224 aa)
 
   
  0.885
NGR_c04260
annotation not available (234 aa)
   
   
    0.823
rpiA
Ribose-5-phosphate isomerase A; Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate (231 aa)
   
        0.652
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium fredii NGR234, Sinorhizobium sp. NGR234
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