STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACP25501.1Putative ribose transport system, substrate-binding protein. (521 aa)    
Predicted Functional Partners:
ACP25500.1
Ribose ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family.
 0.992
ACP25502.1
Putative ribose transport system, substrate-binding protein.
 
 0.980
ACP27100.1
Putative sugar ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family.
 0.970
ACP24422.1
Putative ribose ABC transporter; Permease; Belongs to the binding-protein-dependent transport system permease family.
 0.968
ACP24412.1
Putative transmembrane component of ABC transporter; Belongs to the binding-protein-dependent transport system permease family.
 0.967
ACP24420.1
Putative ribose ABC transporter, ribose-binding protein.
 
 0.965
ACP27098.1
Periplasmic binding protein/LacI transcriptional regulator.
 
 0.941
ACP24414.1
ABC transporter sugar-binding protein.
 
 0.903
ACP24446.1
Hypothetical ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 0.856
ACP24445.1
Putative solute-binding component of ABC transporter.
 
 
 0.819
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium sp. NGR234
Server load: medium (50%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.