STRINGSTRING
dctM protein (Sinorhizobium fredii NGR234) - STRING interaction network
"dctM" - annotation not available in Sinorhizobium fredii NGR234
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dctMannotation not available (596 aa)    
Predicted Functional Partners:
dctQ
annotation not available (191 aa)
     
  0.987
dctP
TRAP dicarboxylate transporter-DctP subunit; Part of the tripartite ATP-independent periplasmic (TRAP) transport system (368 aa)
 
     
  0.812
NGR_c06340
Putative exported solute binding protein; Part of the tripartite ATP-independent periplasmic (TRAP) transport system (365 aa)
 
     
  0.802
NGR_c06350
annotation not available (187 aa)
     
  0.799
NGR_c19430
annotation not available (222 aa)
     
  0.797
NGR_c19440
Possible TRAP dicarboxylate transporter-DctP subunit; Part of the tripartite ATP-independent periplasmic (TRAP) transport system (380 aa)
 
     
  0.776
NGR_a02460
Uncharacterized protein y4mM; y4mM; NGR234_244; Belongs to the bacterial solute-binding protein 7 family (541 aa)
          0.541
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium fredii NGR234, Sinorhizobium sp. NGR234
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