STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACP25604.1Hypothetical protein. (206 aa)    
Predicted Functional Partners:
ACP25613.1
Probable electron transfer protein.
 
   
 0.813
ACP25608.1
Hypothetical protein.
 
     0.801
ACP25601.1
Putative trimethylamine methyltransferase protein; Belongs to the trimethylamine methyltransferase family.
 
     0.790
ACP25610.1
Putative 5-methyltetrahydrofolate--homocysteine methyltransferase.
 
     0.786
ACP25602.1
Corrinoid methyltransferase protein.
 
     0.778
ACP25593.1
Homocysteine S-methyltransferase, putative.
 
     0.725
ACP25011.1
Hypothetical protein.
  
     0.674
ACP25600.1
Hypothetical protein.
  
     0.569
mttB
Trimethylamine methyltransferase MttB; Belongs to the trimethylamine methyltransferase family.
 
     0.548
ACP25605.1
Formyl transferase domain protein.
       0.451
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium sp. NGR234
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.