STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACP25607.1Hypothetical protein. (155 aa)    
Predicted Functional Partners:
ACP23983.1
Hypothetical protein.
  
     0.600
ACP25465.1
Hypothetical protein.
  
     0.583
ACP27200.1
Putative transcriptional regulator, MarR family.
  
     0.528
ACP26055.1
Hypothetical protein.
  
     0.513
ACP24133.1
Predicted sensor histidine kinase protein with ATP-binding domain.
  
     0.502
ACP24276.1
Hypothetical protein.
  
     0.501
ACP24744.1
Putative transmemrbane protein.
  
     0.498
ACP24561.1
Hypothetical protein.
  
     0.478
ACP26551.1
Hypothetical protein.
  
     0.459
ACP26520.1
Hypothetical protein associated with outer membrane protein, beta-barrel.
  
     0.436
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium sp. NGR234
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