Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ACP25636.1Probable regulatory protein. (292 aa)    
Predicted Functional Partners:
ppk
Polyphosphate kinase; Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP). Belongs to the polyphosphate kinase 1 (PPK1) family.
 
  
 0.964
ACP23944.1
Conserved hypothetical protein contains a predicted polyphosphate kinase 2 domain.
  
  
 
0.908
ACP25635.1
Probable sulfate transporter.
  
    0.533
hemN
HemN coproporphyrinogen III oxidase; Belongs to the anaerobic coproporphyrinogen-III oxidase family.
  
    0.518
ACP24727.1
Exopolyphosphatase.
 
  
 0.517
ACP25633.1
Hypothetical protein.
       0.494
ACP25634.1
Putative membrane protein.
       0.494
ACP24539.1
Putative DNAK suppressor protein.
  
    0.454
fixG
Nitrogen fixation protein FixG.
   
    0.430
ACP25418.1
Putative phosphohistidine phosphatase protein.
 
 
   0.408
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium sp. NGR234
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