Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACP25691.1Hypothetical protein. (368 aa)    
Predicted Functional Partners:
ACP25690.1
Putative NTP pyrophosphohydrolase protein, MuT/nudix family.
       0.782
ACP25186.1
Hypothetical protein.
  
     0.717
ACP26135.1
Conserved hypothetical protein.
  
     0.694
ACP26116.1
Putative transmembrane protein.
  
     0.654
ACP24737.1
Putative transmembrane protein.
  
     0.638
motD
Chemotaxis protein motility protein D.
  
     0.622
ACP24887.1
Acetyltransferase.
  
     0.616
ACP26424.1
Conserved hypothetical protein.
  
     0.614
ACP26510.1
Hypothetical protein.
  
     0.573
ACP25632.1
Potassium efflux system KEFA.
  
     0.561
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium sp. NGR234
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