STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACP25692.1Hypothetical protein. (147 aa)    
Predicted Functional Partners:
ACP24009.1
Beta-ketoacyl synthase.
 
 
 0.799
ACP24006.1
Conserved hypothetical protein, contains sulfatase protein domain.
  
     0.759
ACP26751.1
TPR repeat-containing protein; Similar to cellulose biosynthesis protein.
  
   
 0.757
ftsK2
DNA translocase FtsK.
   
 
 0.747
ACP25646.1
Hypothetical protein.
  
     0.697
motD
Chemotaxis protein motility protein D.
 
   
 0.679
ACP25456.1
Hypothetical protein, possibly linked to QS and autoinducer synthesis.
  
     0.665
ACP25901.1
Hypothetical protein.
  
     0.665
ACP25681.1
Putative phage repressor.
  
    0.664
ACP26455.1
Hypothetical protein.
  
     0.654
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium sp. NGR234
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.