STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gfaGlutathione-dependent formaldehyde-activating enzyme; Catalyzes the condensation of formaldehyde and glutathione to S-hydroxymethylglutathione; Belongs to the Gfa family. (191 aa)    
Predicted Functional Partners:
adhC6
Alcohol dehydrogenase class III; Glutathione-dependent formaldehyde dehydrogenase; FDH; FALDH; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily.
    
 0.912
adhC5
Alcohol dehydrogenase class III; Glutathione-dependent formaldehyde dehydrogenase; FDH; FALDH; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily.
    
 0.912
ACP25007.1
Putative esterase; Serine hydrolase involved in the detoxification of formaldehyde.
    
 0.906
ACP25811.1
Esterase; Serine hydrolase involved in the detoxification of formaldehyde.
    
 0.906
gfa2
Glutathione-dependent formaldehyde-activating enzyme; Catalyzes the condensation of formaldehyde and glutathione to S-hydroxymethylglutathione; Belongs to the Gfa family.
  
  
 
0.901
soxA2
Sarcosine oxidase, alpha subunit.
     
  0.900
soxD2
Sarcosine oxidase, delta subunit.
     
  0.900
soxB2
Sarcosine oxidase, beta subunit.
     
  0.900
fdhA1
Glutathione-independent formaldehyde dehydrogenase.
     
  0.900
ACP26780.1
Putative glutathione-dependent formaldehyde dehydrogenase.
     
  0.499
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium sp. NGR234
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