Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ACP25725.1Putative oxidoreductase. (302 aa)    
Predicted Functional Partners:
ACP25726.1
Putative TetR family transcriptional regulator.
 
     0.861
ACP24399.1
long-chain-fatty-acid--CoA ligase.
  
 
 0.647
ACP26754.1
Conserved hypothetical protein.
  
     0.642
ACP24009.1
Beta-ketoacyl synthase.
  
 
 0.639
ACP25435.1
Putative hydrolase.
  
  0.635
ACP25727.1
Putative glutathione S-transferase.
 
 
   0.556
ACP24503.1
Hypothetical protein.
  
     0.511
ACP27218.1
Putative glyoxalase/bleomycin resistance protein/dioxygenase.
  
     0.457
ACP26705.1
Putative transcriptional regulator, TetR family.
  
     0.449
ACP24820.1
Cytochrome P450 hydroxylase.
  
 
 0.428
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium sp. NGR234
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