STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACP25732.1Putative solute-binding component of ABC transporter. (395 aa)    
Predicted Functional Partners:
ACP25912.1
Putative transmembrane component of ABC transporter.
 
  
 0.807
ACP25913.1
Putative transmembrane component of ABC transporter.
 
    0.791
ACP25914.1
Putative ATP-binding component of ABC transporter; Belongs to the ABC transporter superfamily.
 
  
 0.724
ACP24132.1
ABC transporter, membrane spanning protein.
  
  
 0.556
ACP25717.1
Putative transmembrane component of ABC transporter.
  
  
 0.556
ThiP
Thiamine ABC transporter, permease protein.
  
  
 0.556
ACP25733.1
Putative adenylate/guanylate cyclase.
       0.486
ACP25731.1
Putative aminotransferase.
       0.470
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium sp. NGR234
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.