Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ACP25732.1Putative solute-binding component of ABC transporter. (395 aa)    
Predicted Functional Partners:
ACP25912.1
Putative transmembrane component of ABC transporter.
 
  
 0.818
ACP25913.1
Putative transmembrane component of ABC transporter.
 
   
 0.798
ACP25914.1
Putative ATP-binding component of ABC transporter; Belongs to the ABC transporter superfamily.
 
  
 0.691
ACP24132.1
ABC transporter, membrane spanning protein.
  
  
 0.496
ACP25717.1
Putative transmembrane component of ABC transporter.
  
  
 0.496
ThiP
Thiamine ABC transporter, permease protein.
  
  
 0.496
ACP25733.1
Putative adenylate/guanylate cyclase.
       0.486
ACP25731.1
Putative aminotransferase.
       0.470
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium sp. NGR234
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